STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0342Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pmy:Pmen_4350 XRE family transcriptional regulator. (262 aa)    
Predicted Functional Partners:
Kfla_0343
KEGG: reu:Reut_A2665 hypothetical protein.
 
     0.871
Kfla_0789
TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: xop:PXO_03586 HipA.
   
 
 0.786
Kfla_6455
PFAM: HipA domain protein; KEGG: bbt:BBta_7391 hypothetical protein.
   
 
 0.786
Kfla_0341
PFAM: protein of unknown function DUF664.
       0.773
Kfla_4980
PFAM: protein of unknown function DUF1503.
   
 
 0.629
Kfla_6139
PFAM: protein of unknown function DUF1503.
   
 
 0.629
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.