STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0442PFAM: metallophosphoesterase; KEGG: pca:Pcar_0763 phosphohydrolases. (311 aa)    
Predicted Functional Partners:
Kfla_0443
KEGG: gsu:GSU3092 YqeY family protein.
       0.675
Kfla_2563
Hypothetical protein.
  
     0.616
Kfla_3730
Hypothetical protein.
  
     0.614
Kfla_2893
PFAM: protein of unknown function YGGT; KEGG: bmj:BMULJ_00784 YggT family protein.
 
     0.610
Kfla_5735
PFAM: glycosyl transferase family 39; KEGG: geo:Geob_0316 glycosyl transferase family 39.
  
     0.610
Kfla_2675
Hypothetical protein.
  
     0.586
Kfla_3770
Hypothetical protein.
  
     0.582
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: afw:Anae109_1884 phenylalanyl-tRNA synthetase, beta subunit.
  
    0.563
Kfla_1218
Hypothetical protein.
  
     0.545
Kfla_3176
SMART: regulatory protein MerR; KEGG: afw:Anae109_4225 MerR family transcriptional regulator.
  
     0.536
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.