STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0449Hypothetical protein. (53 aa)    
Predicted Functional Partners:
Kfla_0450
PFAM: Endoribonuclease L-PSP; KEGG: oan:Oant_2027 endoribonuclease L-PSP.
  
    0.855
Kfla_5502
Hypothetical protein.
  
     0.771
Kfla_0447
PFAM: Anion-transporting ATPase; KEGG: ank:AnaeK_0987 adventurous gliding motility protein R.
       0.656
Kfla_0448
PFAM: Anion-transporting ATPase; KEGG: afw:Anae109_0972 chromosome partitioning-like ATPase.
       0.656
Kfla_3498
KEGG: hypothetical protein.
  
     0.559
Kfla_0451
PFAM: NUDIX hydrolase; KEGG: rpd:RPD_3111 NUDIX hydrolase.
       0.548
Kfla_0452
PFAM: beta-lactamase domain protein; KEGG: pzu:PHZ_c2735 metallo-beta-lactamase family protein.
       0.548
Kfla_0446
KEGG: lpp:plpp0103 hypothetical protein.
       0.541
Kfla_0554
Hypothetical protein; KEGG: bte:BTH_I2457 CpaE, putative.
  
     0.465
Kfla_0442
PFAM: metallophosphoesterase; KEGG: pca:Pcar_0763 phosphohydrolases.
 
     0.446
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.