STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0642KEGG: sme:SMc00162 hypothetical protein. (285 aa)    
Predicted Functional Partners:
Kfla_0639
Hypothetical protein.
       0.773
Kfla_0640
Hypothetical protein.
       0.773
Kfla_0641
PFAM: GCN5-related N-acetyltransferase; KEGG: vfm:VFMJ11_1463 ribosomal-protein-alanine acetyltransferase.
       0.773
Kfla_0638
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1282 methyltransferase type 11.
       0.661
Kfla_1216
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mmw:Mmwyl1_3508 oxidoreductase domain- containing protein.
 
      0.628
Kfla_0312
KEGG: mxa:MXAN_4606 carbohydrate-binding protein.
  
 
 0.600
Kfla_4948
PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0175 OmpA/MotB family outer membrane protein.
  
 
 0.600
Kfla_0643
PFAM: GCN5-related N-acetyltransferase; KEGG: rpi:Rpic_0026 GCN5-related N- acetyltransferase.
       0.536
Kfla_6513
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bja:bll7636 hypothetical protein.
  
     0.476
Kfla_1998
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: xca:xccb100_2335 GFO/IDH/MocA family oxidoreductase.
 
      0.459
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.