STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0700Hypothetical protein. (92 aa)    
Predicted Functional Partners:
Kfla_0702
PFAM: protein of unknown function DUF1469; KEGG: afw:Anae109_3054 hypothetical protein.
 
     0.938
Kfla_1916
KEGG: sat:SYN_02962 putative cytoplasmic protein.
 
    0.849
Kfla_0701
KEGG: hypothetical protein.
       0.824
Kfla_0381
KEGG: ent:Ent638_0467 hypothetical protein.
  
  
 0.816
Kfla_1618
KEGG: cja:CJA_1584 RloA protein.
  
  
 0.816
Kfla_1688
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ccs:CCNA_01359 myo-inositol catabolism protein IolB.
   
    0.797
Kfla_0703
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlt:Rleg2_5184 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.600
Kfla_6826
Hypothetical protein; KEGG: GK23348 gene product from transcript GK23348- RA.
  
  
 0.507
Kfla_3049
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: mxa:MXAN_5009 type I phosphodiesterase/nucleotide pyrophosphatase family protein.
  
     0.478
Kfla_1042
PFAM: regulatory protein TetR; KEGG: rme:Rmet_3794 putative transcriptional regulator, TetR family.
  
     0.473
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.