STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0721PFAM: Luciferase-like monooxygenase; KEGG: rpb:RPB_4430 luciferase-like. (287 aa)    
Predicted Functional Partners:
Kfla_0720
PFAM: regulatory protein TetR; KEGG: cps:CPS_4004 TetR family transcriptional regulator.
       0.773
Kfla_1586
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: rpb:RPB_4408 hypothetical protein.
 
   
 0.713
Kfla_1587
TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: rpb:RPB_4407 LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.678
Kfla_0722
KEGG: mms:mma_1942 malate synthase; TIGRFAM: malate synthase A; PFAM: malate synthase.
       0.651
Kfla_0718
KEGG: hch:HCH_05270 hypothetical protein.
  
    0.564
Kfla_0719
PFAM: glycosyl transferase family 2; KEGG: bav:BAV2647 capsular polysaccharide biosynthesis glycosyl transferase.
       0.562
Kfla_7041
PFAM: Luciferase-like monooxygenase; KEGG: pzu:PHZ_c2545 5,10- methylenetetrahydromethanopterin reductase.
  
     0.495
Kfla_0727
PFAM: Luciferase-like monooxygenase; KEGG: sme:SM_b20100 putative dehydrogenase protein.
  
     0.492
Kfla_5607
Hypothetical protein.
  
     0.474
Kfla_5820
Hypothetical protein.
  
   
 0.473
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.