STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0799KEGG: scl:sce7436 hypothetical protein. (182 aa)    
Predicted Functional Partners:
Kfla_1924
KEGG: hypothetical protein.
  
     0.592
Kfla_0800
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: scl:sce8225 putative SAM-dependent methyltransferase.
       0.532
Kfla_0801
PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2035 putative membrane transport protein.
       0.532
Kfla_0802
PFAM: alanine racemase domain protein; KEGG: dac:Daci_0971 alanine racemase domain- containing protein.
       0.532
Kfla_1926
Hypothetical protein; KEGG: rlt:Rleg2_5259 nutrient deprivation-induced protein.
  
     0.519
Kfla_4454
PFAM: PRC-barrel domain protein; KEGG: ank:AnaeK_3305 hypothetical protein.
  
     0.491
Kfla_3917
Putative transmembrane anti-sigma factor; KEGG: glo:Glov_1269 hypothetical protein.
  
     0.482
Kfla_5632
Hypothetical protein; KEGG: sde:Sde_2765 TonB-dependent siderophore receptor.
 
     0.424
Kfla_1174
PFAM: aminoglycoside phosphotransferase; KEGG: bmj:BMULJ_03482 putative aminoglycoside phosphotransferase.
  
     0.423
Kfla_6185
PFAM: Phytanoyl-CoA dioxygenase; KEGG: sme:SM_b21341 hypothetical protein.
  
     0.404
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.