STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0873KEGG: scl:sce3586 hypothetical protein. (414 aa)    
Predicted Functional Partners:
Kfla_0874
KEGG: dat:HRM2_14820 hypothetical protein.
 
     0.932
Kfla_0875
PFAM: putative esterase; KEGG: ppd:Ppro_1478 putative esterase.
 
     0.872
Kfla_5445
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: scl:sce8286 gamma-glutamyltransferase.
 
   
 0.521
Kfla_5859
KEGG: hypothetical protein.
  
     0.463
Kfla_5993
Hypothetical protein; KEGG: saz:Sama_0490 Zn-dependent protease with chaperone function.
  
     0.433
Kfla_0981
PFAM: RDD domain containing protein; KEGG: cvi:CV_0874 hypothetical protein.
  
     0.410
Kfla_5977
SMART: von Willebrand factor type A; KEGG: scl:sce8131 hypothetical protein.
  
     0.401
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.