STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0903PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_pAT_728 hypothetical protein. (289 aa)    
Predicted Functional Partners:
Kfla_6391
PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_3097 alpha/beta hydrolase fold.
  
  
 
0.914
Kfla_5120
PFAM: alpha/beta hydrolase fold; KEGG: msl:Msil_3226 alpha/beta hydrolase fold protein.
  
  
 
0.909
Kfla_1385
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
     
  0.900
Kfla_4320
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA4047 haloacid dehalogenase-like hydrolase.
   
 
  0.900
Kfla_0902
KEGG: afw:Anae109_4281 hypothetical protein.
       0.768
ku
Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
       0.663
Kfla_3419
PFAM: alpha/beta hydrolase fold; KEGG: cti:RALTA_A1767 putative oxidoreductase; alpha/beta hydrolase fold.
  
     0.579
Kfla_0904
PFAM: CsbD family protein; KEGG: pfo:Pfl01_4351 CsbD-like; Belongs to the UPF0337 (CsbD) family.
       0.551
Kfla_1945
PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_5295 alpha/beta hydrolase fold.
  
     0.469
Kfla_5356
PFAM: alpha/beta hydrolase fold; KEGG: rsh:Rsph17029_2918 alpha/beta hydrolase fold.
  
     0.429
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.