STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0983PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: pmy:Pmen_4335 rhodanese domain-containing protein. (282 aa)    
Predicted Functional Partners:
Kfla_0984
PFAM: protein of unknown function DUF1416.
 
  
 0.951
Kfla_3476
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: avn:Avin_32980 3-mercaptopyruvate sulfurtransferase protein.
  
  
0.925
Kfla_3327
Sulfite reductase (ferredoxin); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: tdn:Suden_0159 ferredoxin--nitrite reductase.
   
 0.923
Kfla_3325
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.919
Kfla_4026
PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: mlo:mlr1566 cystathionine gamma-lyase.
  
 
 0.918
Kfla_2779
PFAM: aminotransferase class V; KEGG: gur:Gura_1493 aminotransferase, class V.
  
 0.914
Kfla_4909
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sat:SYN_01251 cysteine desulfurase / selenocysteine lyase.
  
 0.914
Kfla_6172
PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_2501 aminotransferase, class I and II.
     
 0.904
Kfla_0298
PFAM: NADPH-dependent FMN reductase; KEGG: bac:BamMC406_5804 FMN reductase.
     
  0.900
Kfla_1902
PFAM: aminotransferase class I and II; KEGG: pfo:Pfl01_2696 aminotransferase, class I and II.
     
  0.900
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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