STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1060PFAM: Heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein. (78 aa)    
Predicted Functional Partners:
Kfla_1058
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ppd:Ppro_3639 heavy metal translocating P- type ATPase.
 
 
 0.987
Kfla_1524
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_1015 copper-translocating P-type ATPase.
  
 
 0.928
Kfla_1059
Hypothetical protein; KEGG: lpn:lpg1627 putative secreted protein.
     
 0.879
Kfla_1061
PFAM: protein of unknown function DUF156; KEGG: ade:Adeh_3495 hypothetical protein.
 
  
 0.855
Kfla_4797
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: noc:Noc_0290 penicillinase repressor.
  
  
 0.757
Kfla_1783
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: sde:Sde_1925 GGDEF family protein.
  
    0.578
Kfla_1527
PFAM: protein of unknown function DUF156; KEGG: ade:Adeh_3495 hypothetical protein.
 
  
 0.571
Kfla_1063
Hypothetical protein.
     
 0.444
Kfla_1062
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_1642 ABC transporter related.
       0.431
Kfla_4172
PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: xau:Xaut_0419 copper resistance D domain- containing protein.
     
 0.419
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.