STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1063Hypothetical protein. (329 aa)    
Predicted Functional Partners:
Kfla_1062
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_1642 ABC transporter related.
 
   0.957
Kfla_5557
Hypothetical protein.
 
     0.676
Kfla_4446
KEGG: mms:mma_1916 hypothetical protein.
  
     0.635
Kfla_5972
KEGG: SNF2 superfamily protein.
  
     0.560
Kfla_4449
KEGG: saz:Sama_3223 hypothetical protein.
  
    0.545
Kfla_5975
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce2313 protein kinase.
  
    0.523
Kfla_5970
KEGG: mca:MCA1631 hypothetical protein.
  
    0.492
Kfla_1061
PFAM: protein of unknown function DUF156; KEGG: ade:Adeh_3495 hypothetical protein.
       0.485
Kfla_4612
ATP-dependent nuclease subunit B-like protein; KEGG: scl:sce0197 hypothetical protein.
  
     0.458
Kfla_1060
PFAM: Heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein.
     
 0.444
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.