STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1223PFAM: sodium/hydrogen exchanger; KEGG: mch:Mchl_3355 sodium/hydrogen exchanger. (414 aa)    
Predicted Functional Partners:
Kfla_1930
KEGG: mpo:Mpop_0642 putative DNA-binding protein.
 
     0.695
Kfla_1222
KEGG: scl:sce7864 putative DNA-3-methyladenine glycosidase.
       0.594
Kfla_5817
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.479
Kfla_1224
Transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cak:Caul_4403 transcriptional activator FtrA.
       0.471
Kfla_1611
PFAM: protein of unknown function DUF1206; KEGG: afw:Anae109_1905 hypothetical protein.
 
     0.464
Kfla_4457
Multi-sensor signal transduction histidine kinase; KEGG: scl:sce0206 two-component system sensor histidine kinase/response regulator, hybrid ('one- component system'); TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region A [...]
 
 
 
 0.458
Kfla_1221
Hypothetical protein.
       0.441
Kfla_5282
KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: response regulator receiver.
 
  
 0.439
Kfla_1927
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pzu:PHZ_c1822 hypothetical protein.
 
     0.430
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
  
    0.424
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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