STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1320PFAM: periplasmic binding protein; KEGG: oan:Oant_2827 periplasmic binding protein. (343 aa)    
Predicted Functional Partners:
Kfla_6701
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_3639 ABC transporter related.
 
 
 0.870
Kfla_0601
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit.
 
 
 0.865
Kfla_5165
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_2824 ABC transporter related.
 
 
 0.844
Kfla_6703
PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.792
Kfla_0599
PFAM: transport system permease protein; KEGG: sme:SMa1745 ABC transporter, permease, Fe3+- siderophore transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.782
Kfla_5167
PFAM: transport system permease protein; KEGG: rsq:Rsph17025_3332 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.720
Kfla_2361
PFAM: periplasmic binding protein; KEGG: mes:Meso_0133 periplasmic binding protein.
 
  
0.664
Kfla_6702
PFAM: transport system permease protein; KEGG: rsh:Rsph17029_3059 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.661
Kfla_5847
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3334 hypothetical protein.
 
 
 0.644
Kfla_1319
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4017 extracellular solute-binding protein.
       0.601
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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