STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBTIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ppw:PputW619_2036 xylulokinase. (472 aa)    
Predicted Functional Partners:
xylA-2
KEGG: mes:Meso_2820 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.983
xylA
Xylose isomerase; KEGG: similar to predicted protein; K01805 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.982
Kfla_0657
PFAM: carbohydrate kinase FGGY; KEGG: sea:SeAg_B4007 putative sugar.
 
  
  0.952
Kfla_5147
Ribulose-phosphate 3-epimerase; KEGG: gme:Gmet_0067 ribulose-5-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.915
Kfla_2475
Hypothetical protein.
     
  0.900
Kfla_1361
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: seh:SeHA_C3263 putative transcriptional regulator, DeoR family.
  
  
 0.820
Kfla_1360
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: csa:Csal_0643 mannitol dehydrogenase-like protein.
 
   
 0.697
Kfla_1214
PFAM: carbohydrate kinase FGGY; KEGG: lch:Lcho_0132 xylulokinase.
 
     0.667
Kfla_1359
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_2438 binding-protein dependent transport system inner membrane protein.
 
     0.665
Kfla_1358
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_1093 binding-protein-dependent transport systems inner membrane component.
 
     0.615
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.