STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1465PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1221 probable sugar transport inner membrane protein. (297 aa)    
Predicted Functional Partners:
Kfla_1466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120664 putative permease component of ABC transporter.
   0.958
Kfla_1467
PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL3847 putative solute-binding component of ABC transporter.
 
   0.911
Kfla_4167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
 0.826
Kfla_0366
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
   0.825
Kfla_4510
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20232 putative suagr ABC transporter permease protein.
   0.825
Kfla_1899
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
 0.824
Kfla_6654
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C6934 ABC sugar transporter, inner membrane subunit.
 
 0.824
Kfla_1993
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7001 ABC transporter, permease protein.
   0.823
Kfla_6693
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_3284 maltose-binding periplasmic protein.
 
 0.823
Kfla_0047
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_5336 binding-protein-dependent transport systems inner membrane component.
 
 0.822
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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