STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1819PFAM: FAD linked oxidase domain protein; D- arabinono-14-lactone oxidase; KEGG: hypothetical protein. (410 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; KEGG: similar to predicted protein; K01805 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
  
  0.916
xylA-2
KEGG: mes:Meso_2820 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
  
  0.916
Kfla_3354
PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: xau:Xaut_1138 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.905
Kfla_0583
Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; KEGG: beta-galactosidase.
    
  0.803
Kfla_4506
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sme:SM_b21655 beta-galactosidase protein; Belongs to the glycosyl hydrolase 2 family.
    
  0.803
Kfla_0661
PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase.
     
  0.800
Kfla_1462
PFAM: ROK family protein; KEGG: rlt:Rleg2_5489 ROK family protein.
     
  0.800
Kfla_2585
PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase.
     
  0.800
Kfla_2820
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: afw:Anae109_0167 ROK family protein.
     
  0.800
Kfla_2821
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase.
     
  0.800
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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