STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1882PFAM: isochorismatase hydrolase; KEGG: bph:Bphy_0542 isochorismatase hydrolase. (176 aa)    
Predicted Functional Partners:
Kfla_2815
PFAM: isochorismatase hydrolase; KEGG: cvi:CV_4239 amidase.
  
     0.724
Kfla_1883
Hypothetical protein.
       0.671
Kfla_2808
PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN1846 isochorismatase.
  
     0.658
Kfla_2519
PFAM: isochorismatase hydrolase; KEGG: mes:Meso_2306 isochorismatase hydrolase.
  
     0.586
Kfla_1881
PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: scl:sce3321 hypothetical protein.
     
 0.511
Kfla_1880
PFAM: Fibronectin type III domain protein; KEGG: dol:Dole_0956 hypothetical protein.
       0.473
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.465
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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