STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_1944KEGG: rle:RL0999 putative two-component regulator sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein. (414 aa)    
Predicted Functional Partners:
Kfla_1945
PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_5295 alpha/beta hydrolase fold.
 
    0.924
Kfla_0571
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.860
Kfla_6363
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ppd:Ppro_2660 anti-sigma-factor antagonist.
 
 
 0.857
Kfla_4457
Multi-sensor signal transduction histidine kinase; KEGG: scl:sce0206 two-component system sensor histidine kinase/response regulator, hybrid ('one- component system'); TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region A [...]
 
 
0.833
Kfla_6490
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pzu:PHZ_c2536 hypothetical protein.
   
  
 0.750
Kfla_1946
Hypothetical protein.
       0.737
Kfla_5380
Protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation E family protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: rlt:Rleg2_5205 multi-sensor hybrid histidine kinase.
 
0.694
Kfla_1943
PFAM: cytochrome P450; KEGG: mxa:MXAN_4919 cytochrome P450 family protein.
       0.682
Kfla_5381
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.656
Kfla_5378
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mca:MCA2071 hypothetical protein.
 
 
 0.599
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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