Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Kfla_2012PFAM: periplasmic solute binding protein; KEGG: met:M446_2656 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (519 aa)    
Predicted Functional Partners:
Kfla_2011
Hypothetical protein.
     0.990
Kfla_2010
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_0248 ABC transporter related.
 
  
 0.981
Kfla_2009
PFAM: ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
 
  
 0.980
Kfla_4075
PFAM: ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
 
  
 0.908
Kfla_2457
PFAM: ABC-3 protein; KEGG: gsu:GSU2984 ABC transporter, permease protein.
 
  
 0.899
Kfla_2013
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: hypothetical protein.
    
0.869
Kfla_2008
Hypothetical protein.
 
    
0.836
Kfla_2007
Hypothetical protein.
    
0.830
Kfla_4076
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3562 ABC transporter-related protein.
 
  
 0.828
Kfla_2458
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2985 ABC transporter, ATP-binding protein.
 
  
 0.814
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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