STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2094PFAM: integrase family protein; KEGG: mch:Mchl_3323 integrase family protein; Belongs to the 'phage' integrase family. (397 aa)    
Predicted Functional Partners:
Kfla_2093
PFAM: regulatory protein MerR; KEGG: mno:Mnod_7734 hypothetical protein.
 
   
 0.946
Kfla_2092
Hypothetical protein.
 
  
 0.811
Kfla_1631
KEGG: rpe:RPE_0152 phosphoribosyltransferase.
   
    0.491
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.483
Kfla_3234
PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; KEGG: bav:BAV1351 prephenate dehydrogenase.
  
    0.462
Kfla_5218
PFAM: protein of unknown function DUF159; KEGG: eba:ebA145 hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
  
 0.447
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
   
    0.443
Kfla_3326
Hypothetical protein.
  
     0.431
Kfla_2091
Hypothetical protein.
       0.423
Kfla_4457
Multi-sensor signal transduction histidine kinase; KEGG: scl:sce0206 two-component system sensor histidine kinase/response regulator, hybrid ('one- component system'); TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region A [...]
  
  
 0.405
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.