STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2656Hypothetical protein; KEGG: rec:RHECIAT_CH0002514 putative cytochrome c biogenesis protein. (512 aa)    
Predicted Functional Partners:
Kfla_2655
Heme exporter protein CcmA; KEGG: mxa:MXAN_4750 ABC transporter, ATP-binding protein; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.951
Kfla_5620
Hypothetical protein; KEGG: proteophosphoglycan 5.
  
     0.766
Kfla_2654
PFAM: O-methyltransferase family 3; KEGG: aeh:Mlg_0966 caffeoyl-CoA O-methyltransferase.
       0.737
Kfla_0145
KEGG: bvi:Bcep1808_6257 hypothetical protein.
  
     0.639
Kfla_2657
PFAM: transcriptional regulator PadR family protein; KEGG: pzu:PHZ_c1647 predicted transcriptional regulator.
       0.610
Kfla_2658
Hypothetical protein.
       0.610
Kfla_1600
Hypothetical protein.
  
     0.579
Kfla_0330
Hypothetical protein.
  
     0.562
Kfla_1030
KEGG: sun:SUN_1004 hypothetical protein.
  
     0.557
Kfla_4983
Hypothetical protein; KEGG: pin:Ping_2576 membrane-flanked domain- containing protein.
  
     0.532
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.