STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2735PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: mxa:MXAN_5269 lysyl endopeptidase domain- containing protein. (983 aa)    
Predicted Functional Partners:
Kfla_2727
PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: oan:Oant_1020 polysaccharide biosynthesis protein.
 
    0.807
Kfla_2734
PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sde:Sde_3605 glycosyl hydrolase family chitinase.
 
    
0.778
Kfla_2732
Hypothetical protein.
 
     0.775
Kfla_2731
PFAM: sulfotransferase; KEGG: rsp:RSP_3846 putative deacetylase sulfotransferase.
 
     0.768
Kfla_2728
PFAM: lipopolysaccharide biosynthesis protein; KEGG: scl:sce7318 protein tyrosine kinase.
 
     0.757
Kfla_2729
PFAM: glycosyl transferase family 2; KEGG: dol:Dole_0985 glycosyl transferase family protein.
 
    0.740
Kfla_6840
Hypothetical protein.
  
     0.604
Kfla_2511
Hypothetical protein.
  
     0.548
Kfla_3076
PFAM: metallophosphoesterase; KEGG: met:M446_1703 metallophosphoesterase.
  
     0.535
Kfla_2726
KEGG: dal:Dalk_5024 regulator of chromosome condensation RCC1.
 
     0.528
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.