STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2753KEGG: mno:Mnod_5589 hypothetical protein. (516 aa)    
Predicted Functional Partners:
Kfla_2748
SMART: LamG domain protein jellyroll fold domain protein; KEGG: cja:CJA_0343 rhs repeat family.
  
     0.673
Kfla_2747
Hypothetical protein; KEGG: cja:CJA_0343 rhs repeat family.
  
     0.670
Kfla_1767
Hypothetical protein; KEGG: cja:CJA_0343 rhs repeat family.
  
     0.666
Kfla_2760
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: scl:sce2797 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.605
Kfla_2754
PFAM: Glucuronate isomerase; KEGG: avi:Avi_3892 glucuronate isomerase protein.
       0.603
Kfla_2749
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mrd:Mrad2831_5360 lipopolysaccharide biosynthesis protein.
 
     0.512
Kfla_0749
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: mxa:MXAN_7458 FG-GAP repeat-fibronectin type III domain-containing protein.
  
     0.474
Kfla_4131
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: HADHA; hydroxyacyl-Coenzyme A dehydrogenase/3- ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit; K07510 long-chain 3-hydroxyacyl-CoA dehydrogenase.
  
     0.433
Kfla_2755
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator.
       0.426
Kfla_1063
Hypothetical protein.
  
 
 0.424
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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