STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2790Membrane protein-like protein; KEGG: csa:Csal_0081 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Kfla_5749
Hypothetical protein; KEGG: rpb:RPB_2596 copper resistance protein.
   
 0.941
Kfla_5612
Hypothetical protein; KEGG: rpb:RPB_2596 copper resistance protein.
   
 0.927
Kfla_2788
PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0456 cytochrome c oxidase, cbb3- type, subunit III.
 
  
 0.897
Kfla_2787
PFAM: Rieske [2Fe-2S] domain protein; KEGG: vei:Veis_4950 Rieske (2Fe-2S) domain- containing protein.
 
    0.878
Kfla_2786
PFAM: Cytochrome b/b6 domain; KEGG: nme:NMB2052 cytochrome b.
 
  
 0.873
Kfla_2789
PFAM: cytochrome c oxidase subunit III; KEGG: eca:ECA1141 cytochrome o ubiquinol oxidase subunit III.
 
  
 0.852
Kfla_5683
PFAM: Cytochrome b/b6 domain; KEGG: geo:Geob_0125 cytochrome b/b6 domain protein.
 
  
 0.733
Kfla_3865
PFAM: Cytochrome b/b6 domain; KEGG: gsu:GSU1649 cytochrome b/b6.
 
  
 0.725
Kfla_2782
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.714
Kfla_3274
PFAM: cytochrome oxidase assembly; KEGG: mca:MCA1778 cytochrome oxidase assembly protein.
 
   
 0.664
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.