Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Kfla_2853 | Kfla_2854 | KEGG: scl:sce2492 hypothetical protein. | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | 0.709 |
Kfla_2853 | Kfla_2855 | KEGG: scl:sce2492 hypothetical protein. | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | 0.709 |
Kfla_2853 | Kfla_2856 | KEGG: scl:sce2492 hypothetical protein. | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | 0.503 |
Kfla_2854 | Kfla_2853 | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | KEGG: scl:sce2492 hypothetical protein. | 0.709 |
Kfla_2854 | Kfla_2855 | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | 0.814 |
Kfla_2854 | Kfla_2856 | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | 0.825 |
Kfla_2855 | Kfla_2853 | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | KEGG: scl:sce2492 hypothetical protein. | 0.709 |
Kfla_2855 | Kfla_2854 | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | 0.814 |
Kfla_2855 | Kfla_2856 | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | 0.824 |
Kfla_2856 | Kfla_2853 | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | KEGG: scl:sce2492 hypothetical protein. | 0.503 |
Kfla_2856 | Kfla_2854 | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | KEGG: rpi:Rpic_2728 alpha/beta hydrolase. | 0.825 |
Kfla_2856 | Kfla_2855 | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase. | Carboxylesterase; KEGG: bav:BAV1606 carboxylesterase. | 0.824 |