STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2871PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: psb:Psyr_0641 SmtA protein. (248 aa)    
Predicted Functional Partners:
Kfla_2872
Hypothetical protein.
 
     0.637
Kfla_3326
Hypothetical protein.
  
     0.542
Kfla_5185
Hypothetical protein.
  
     0.532
Kfla_0546
PFAM: filamentation induced by cAMP protein Fic; KEGG: acp:A2cp1_0593 filamentation induced by cAMP protein Fic.
  
     0.496
Kfla_6040
PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_2207 alpha/beta hydrolase.
  
     0.433
Kfla_0447
PFAM: Anion-transporting ATPase; KEGG: ank:AnaeK_0987 adventurous gliding motility protein R.
  
     0.420
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
 
     0.405
Kfla_3736
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
   
 0.401
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.