STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2934PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN0982 methionine--tRNA ligase. (130 aa)    
Predicted Functional Partners:
Kfla_2933
Methionine--tRNA ligase; PFAM: tRNA synthetase class I (M); KEGG: mlo:mlr5926 tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.777
Kfla_2928
PFAM: protein of unknown function DUF201; KEGG: lpc:LPC_0260 hypothetical protein.
       0.775
Kfla_2929
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4255 major facilitator transporter.
       0.773
Kfla_2930
PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: plu:plu0116 hypothetical protein.
       0.773
Kfla_2931
KEGG: geo:Geob_2055 hypothetical protein.
       0.773
Kfla_2932
L-lysine 6-monooxygenase (NADPH); PFAM: FAD dependent oxidoreductase; KEGG: avi:Avi_5731 L-ornithine N5-oxygenase.
       0.773
Kfla_2717
KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.584
Kfla_2741
KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.584
Kfla_2935
Hypothetical protein.
       0.400
Kfla_2936
KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie.
       0.400
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.