STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_2976PFAM: membrane-bound metal-dependent hydrolase. (268 aa)    
Predicted Functional Partners:
Kfla_2977
PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: hch:HCH_06527 leucine-rich repeat-containing protein.
       0.773
Kfla_1550
PFAM: protein of unknown function DUF574; KEGG: mxa:MXAN_2293 hypothetical protein.
  
     0.702
Kfla_2193
PFAM: C-5 cytosine-specific DNA methylase; KEGG: ajs:Ajs_4214 C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
    0.609
Kfla_5930
PFAM: metallophosphoesterase; KEGG: saz:Sama_1012 hypothetical protein.
 
     0.604
Kfla_1908
PFAM: protein of unknown function DUF397.
  
     0.579
Kfla_1549
Hypothetical protein.
  
    0.552
Kfla_3695
Hypothetical protein.
  
    0.535
Kfla_1905
SMART: helix-turn-helix domain protein.
  
    0.525
Kfla_2975
PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: sde:Sde_0644 hypothetical protein.
       0.517
Kfla_3404
Hypothetical protein.
  
    0.511
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.