STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3019Putative transcriptional regulator, ArsR family. (322 aa)    
Predicted Functional Partners:
Kfla_3020
Hypothetical protein; KEGG: xcb:XC_1944 MFS transporter.
 
     0.896
Kfla_5199
Hypothetical protein; KEGG: bmn:BMA10247_A2204 alpha-1,2-mannosidase family protein.
  
     0.570
Kfla_5942
KEGG: RBM15; RNA binding motif protein 15.
  
     0.540
Kfla_4255
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; KEGG: mlo:mll4650 adenylate cyclase cya3.
  
    0.504
Kfla_4043
Hypothetical protein.
  
     0.481
Kfla_5943
Hypothetical protein.
  
     0.471
Kfla_3904
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pca:Pcar_2839 metal-regulated homodimeric transcriptional regulator.
  
     0.463
Kfla_3022
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cak:Caul_4854 thioredoxin; Belongs to the thioredoxin family.
       0.462
Kfla_3021
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: xac:XAC0318 MerR family transcriptional regulator.
       0.458
Kfla_2623
PFAM: metallophosphoesterase; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: afw:Anae109_2153 pyrrolo-quinoline quinone.
 
     0.448
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.