STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3130Hypothetical protein; KEGG: sse:Ssed_2634 ribonuclease. (372 aa)    
Predicted Functional Partners:
Kfla_3132
KEGG: pau:PA14_20170 NosY protein.
 
     0.911
Kfla_3131
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_0670 ABC transporter-related protein.
 
     0.882
Kfla_7065
PFAM: cell wall hydrolase/autolysin; Peptidoglycan- binding domain 1 protein; SMART: cell wall hydrolase/autolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase.
  
   0.804
Kfla_5246
PFAM: protein of unknown function DUF214; KEGG: azo:azo1881 ABC transporter permease protein.
   
 
 0.696
Kfla_0208
PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_1773 hypothetical protein.
   
 
 0.557
Kfla_0536
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
   
 
 0.557
Kfla_3203
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0436 protein of unknown function DUF214.
   
 
 0.557
Kfla_3231
PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein.
   
 
 0.557
Kfla_3991
PFAM: protein of unknown function DUF214; KEGG: GK10816 gene product from transcript GK10816- RA.
   
 
 0.557
Kfla_5469
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0436 protein of unknown function DUF214.
   
 
 0.557
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.