STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3146PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bph:Bphy_4192 monooxygenase FAD-binding. (529 aa)    
Predicted Functional Partners:
Kfla_3148
Hypothetical protein; KEGG: mxa:MXAN_0918 2-amino-3-carboxylmuconate-6- semialdehyde decarboxylase.
  
  
 0.806
Kfla_3143
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: azc:AZC_1631 2-keto-4-pentenoate hydratase.
  
  
 0.793
Kfla_3147
PFAM: Cupin 2 conserved barrel domain protein; KEGG: abo:ABO_1879 hypothetical protein.
     
 0.780
Kfla_3144
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cvi:CV_1922 GntR family transcriptional regulator.
       0.773
Kfla_3145
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_1685 2,3-dihydroxybenzoate-2,3- dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
Kfla_3138
PFAM: NMT1/THI5 like domain protein; KEGG: oca:OCAR_7362 putative membrane lipoprotein lipid attachment site.
 
     0.723
Kfla_3140
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oca:OCAR_7360 binding-protein-dependent transport systems inner membrane component.
 
     0.662
Kfla_3139
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr2838 ABC transporter ATP-binding protein.
 
     0.653
Kfla_3142
PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0915 endoribonuclease L-PSP.
  
    0.624
Kfla_3141
PFAM: Malate/L-lactate dehydrogenase; KEGG: rhi:NGR_c25880 malate/L-sulfolactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.603
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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