STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3166PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: acp:A2cp1_3920 activator of HSP90 ATPase 1 family protein. (147 aa)    
Predicted Functional Partners:
Kfla_3165
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3921 transcriptional regulator, ArsR family.
 
    0.884
Kfla_3167
Hypothetical protein.
      0.834
Kfla_3163
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: scl:sce5149 ECF subfamily RNA polymerase sigma-70 factor.
       0.553
Kfla_3164
PFAM: YCII-related; KEGG: mxa:MXAN_0680 DGPF domain-containing protein.
       0.553
Kfla_3635
PFAM: Activator of Hsp90 ATPase 1 family protein; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: met:M446_1799 activator of HSP90 ATPase 1 family protein.
  
    0.469
Kfla_0650
PFAM: Chloramphenicol phosphotransferase family protein; KEGG: mlo:mll3789 weak similarity to chloramphenicol phosphotransferase.
  
     0.455
Kfla_3168
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: geo:Geob_2837 CDP-diacylglycerol/glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.428
Kfla_3169
PFAM: protein of unknown function DUF881.
       0.428
Kfla_3170
PFAM: protein of unknown function DUF1290.
       0.428
Kfla_3171
PFAM: protein of unknown function DUF881; KEGG: azc:AZC_3547 hypothetical protein.
       0.428
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.