STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3169PFAM: protein of unknown function DUF881. (278 aa)    
Predicted Functional Partners:
Kfla_3170
PFAM: protein of unknown function DUF1290.
 
  
 0.987
Kfla_3171
PFAM: protein of unknown function DUF881; KEGG: azc:AZC_3547 hypothetical protein.
 
   
 0.966
Kfla_3168
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: geo:Geob_2837 CDP-diacylglycerol/glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.852
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.766
Kfla_3173
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_2520 FHA domain-TPR-repeat- containing protein.
       0.667
Kfla_3174
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sit:TM1040_3746 MerR family transcriptional regulator.
       0.667
Kfla_3175
PFAM: protein of unknown function DUF151; KEGG: dal:Dalk_2411 protein of unknown function DUF151.
     
 0.574
Kfla_0331
Hypothetical protein.
  
     0.533
Kfla_2994
TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cha:CHAB381_0585 CDP-diacylglycerol--glycerol- 3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.455
Kfla_5728
PFAM: Transglycosylase domain protein; protein of unknown function DUF348; G5 domain protein.
  
     0.447
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.