STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3194PFAM: pentapeptide repeat protein. (265 aa)    
Predicted Functional Partners:
Kfla_3190
PFAM: peptidase S51 dipeptidase E; KEGG: ara:Arad_2626 hypothetical protein.
 
     0.676
Kfla_3738
Hypothetical protein; KEGG: lpc:LPC_2172 nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase.
 
     0.597
Kfla_1253
PFAM: peptidase S51 dipeptidase E; KEGG: ara:Arad_2626 hypothetical protein.
  
     0.530
Kfla_3195
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: similar to predicted protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.466
Kfla_4938
PFAM: transglutaminase domain protein; KEGG: ret:RHE_PE00204 hypothetical protein.
  
     0.449
Kfla_3193
PFAM: protein of unknown function DUF664.
       0.435
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.418
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.