STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3208Hypothetical protein. (152 aa)    
Predicted Functional Partners:
Kfla_3207
RecB family exonuclease-like protein; KEGG: hypothetical protein.
       0.580
Kfla_3209
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: amc:MADE_00921 BNR/Asp-box repeat protein.
       0.538
Kfla_3210
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120558 putative transmembrane transporter permease component.
       0.538
Kfla_3211
PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce3057 sugar ABC transporter substrate- binding protein.
       0.538
Kfla_3212
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpt:Rpal_0057 ABC transporter related; Belongs to the ABC transporter superfamily.
       0.538
Kfla_3213
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0774 binding-protein-dependent transport systems inner membrane component.
       0.451
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.