STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3248PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cvi:CV_2394 cell division FtsK transmembrane protein. (1341 aa)    
Predicted Functional Partners:
Kfla_3250
TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571; KEGG: mrd:Mrad2831_4589 transport system permease protein.
 
 
 0.827
Kfla_0757
PFAM: protein of unknown function DUF690.
 
 
 0.750
Kfla_0756
TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571; KEGG: pol:Bpro_0191 protein of unknown function DUF6, transmembrane.
 
 
 0.741
Kfla_3287
Hypothetical protein.
   
 
 0.670
Kfla_3358
ATPase-like protein involved in chromosome partitioning; KEGG: proteophosphoglycan 5.
 
   
 0.548
Kfla_3247
Hypothetical protein.
       0.544
Kfla_2888
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
 
 0.501
Kfla_6906
PFAM: protein of unknown function DUF1023.
  
     0.439
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.