STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3302PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: avn:Avin_07770 zinc metallopeptidase. (277 aa)    
Predicted Functional Partners:
Kfla_1027
PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: bpm:BURPS1710b_1102 putative lipoprotein.
  
     0.775
Kfla_1028
PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: rpc:RPC_4365 protein of unknown function, zinc metallopeptidase putative.
  
     0.775
Kfla_1034
PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ecw:EcE24377A_2755 hypothetical protein.
  
     0.775
Kfla_2341
KEGG: ypy:YPK_1366 protein of unknown function zinc metallopeptidase putative.
  
     0.774
Kfla_1278
PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: gme:Gmet_2726 protein of unknown function, zinc metallopeptidase putative.
  
     0.773
Kfla_1191
KEGG: kpe:KPK_1327 hypothetical protein.
  
     0.771
Kfla_1190
PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ypb:YPTS_2885 protein of unknown function zinc metallopeptidase putative.
  
     0.761
Kfla_1390
KEGG: pap:PSPA7_5433 hypothetical protein.
  
     0.665
Kfla_0333
PFAM: protein of unknown function DUF853 NPT hydrolase putative; SMART: AAA ATPase; KEGG: pzu:PHZ_c3496 conserved predicted ATPase.
  
     0.627
Kfla_3303
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00466 ABC transporter ATP-binding protein.
       0.517
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.