STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3481PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_2251 alpha/beta hydrolase fold-1. (263 aa)    
Predicted Functional Partners:
Kfla_3480
PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B2107 dihydrodipicolinate synthase family protein; Belongs to the DapA family.
       0.773
Kfla_2343
PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_1353 alpha/beta hydrolase fold.
  
     0.691
Kfla_1945
PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_5295 alpha/beta hydrolase fold.
  
     0.610
Kfla_6619
PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_0555 alpha/beta hydrolase fold.
  
     0.599
Kfla_3479
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0303 LysR family transcriptional regulator.
       0.554
Kfla_1772
PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_3789 alpha/beta hydrolase fold.
  
   
 0.548
Kfla_4034
PFAM: alpha/beta hydrolase fold; KEGG: ara:Arad_7247 alpha/beta hydrolase protein.
  
     0.543
Kfla_0461
PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_0555 alpha/beta hydrolase fold.
  
     0.511
Kfla_0225
PFAM: alpha/beta hydrolase fold; KEGG: ara:Arad_7247 alpha/beta hydrolase protein.
  
     0.508
Kfla_5356
PFAM: alpha/beta hydrolase fold; KEGG: rsh:Rsph17029_2918 alpha/beta hydrolase fold.
  
     0.507
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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