STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3565Triacylglycerol lipase; KEGG: hypothetical protein. (262 aa)    
Predicted Functional Partners:
Kfla_3566
KEGG: pla:Plav_2389 hypothetical protein.
       0.484
Kfla_2694
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; NB-ARC domain protein; transcriptional regulator domain protein; KEGG: bpy:Bphyt_6136 transcriptional regulator, winged helix family.
  
     0.418
Kfla_6450
PFAM: protein of unknown function DUF185; KEGG: tgr:Tgr7_0329 protein of unknown function DUF185.
  
     0.418
Kfla_2664
PFAM: glycoside hydrolase family 76; KEGG: glycosyl hydrolase, putative.
  
     0.404
Kfla_3034
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; TPR repeat- containing protein; NB-ARC domain protein; transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce6858 hypothetical protein.
  
     0.401
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.