STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3614Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: scl:sce6697 putative transcriptional regulator. (251 aa)    
Predicted Functional Partners:
Kfla_0636
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bph:Bphy_6164 TetR family transcriptional regulator.
  
     0.712
Kfla_3611
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce5645 carbohydrate ABC transporter.
       0.556
Kfla_3612
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter.
       0.556
Kfla_3613
PFAM: regulatory protein TetR; KEGG: scl:sce5643 TetR family transcriptional regulator.
       0.556
Kfla_1545
PFAM: regulatory protein TetR; KEGG: bac:BamMC406_0683 TetR family transcriptional regulator.
  
     0.535
Kfla_3615
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter.
       0.495
Kfla_2211
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_5618 Aha1 domain-containing protein.
  
     0.448
Kfla_6686
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: oxidoreductase, putative.
  
     0.446
Kfla_3040
KEGG: afw:Anae109_1213 hypothetical protein.
  
     0.425
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.