STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3852PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: smd:Smed_3962 ABC transporter related; Belongs to the ABC transporter superfamily. (381 aa)    
Predicted Functional Partners:
Kfla_3851
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_3963 binding-protein-dependent transport systems inner membrane component.
  
 0.986
Kfla_3850
KEGG: smd:Smed_3960 ABC transporter periplasmic solute-binding protein.
 
 
  0.971
Kfla_6496
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.937
Kfla_6421
KEGG: rhi:NGR_b20730 sugar ABC transporter, permease protein, putative.
  
 
 0.916
Kfla_3853
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpe:RPE_4185 HAD-superfamily hydrolase, subfamily IA, variant 3.
 
     0.846
Kfla_2959
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: vfi:VF_0691 oligopeptide transport ATP- binding protein OppD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.839
Kfla_4250
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pin:Ping_0548 ABC oligopeptide/dipeptide transporter ATP-binding protein.
 
    
0.836
Kfla_1615
KEGG: mlo:mlr6085 ABC transporter, ATP-binding component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.825
Kfla_3855
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: tau:Tola_0326 Cof-like hydrolase.
 
     0.779
Kfla_4571
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
 
 
 0.745
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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