STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_3969PFAM: glycoside hydrolase 15-related; KEGG: scl:sce1562 glycosyl hydrolase. (601 aa)    
Predicted Functional Partners:
Kfla_1215
PFAM: glycosyl transferase family 20; KEGG: scl:sce0488 Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
   
 0.815
Kfla_3970
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce1528 glucose 1-dehydrogenase.
       0.778
Kfla_1220
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
   
 0.637
Kfla_0737
Malto-oligosyltrehalose synthase; KEGG: xca:xccb100_0444 (1->4)-alpha-D-glucan 1- alpha-D-glucosylmutase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
   
 0.577
Kfla_0738
KEGG: gsu:GSU2358 isoamylase family protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
 
  
 0.577
Kfla_4951
KEGG: mrd:Mrad2831_1598 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
   
 0.573
Kfla_3971
PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA0071 putative monooxygenase.
       0.537
Kfla_3967
PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: atc:AGR_L_236 hypothetical protein slr1343.
       0.529
Kfla_3968
KEGG: met:M446_4604 hypothetical protein.
       0.529
glgE
Alpha amylase catalytic sub domain protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
   
 0.473
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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