STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4059PFAM: ANTAR domain protein; GAF domain protein; KEGG: azo:azo1490 putative signaling protein. (241 aa)    
Predicted Functional Partners:
Kfla_5804
PFAM: ANTAR domain protein; KEGG: dia:Dtpsy_2319 response regulator receiver and ANTAR domain protein.
  
     0.759
Kfla_4060
Hypothetical protein; KEGG: hha:Hhal_0173 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
    
0.758
Kfla_5803
PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: mno:Mnod_2540 multi-sensor signal transduction histidine kinase.
  
     0.751
Kfla_4058
TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: eca:ECA0843 manganese transport protein MntH.
       0.474
Kfla_3167
Hypothetical protein.
  
     0.469
Kfla_1455
Hypothetical protein.
  
     0.452
Kfla_2946
Hypothetical protein; KEGG: rpc:RPC_2708 outer membrane autotransporter barrel.
  
     0.446
Kfla_2308
KEGG: acp:A2cp1_4303 hypothetical protein.
  
     0.413
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.