STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4069Hypothetical protein; KEGG: rsp:RSP_0272 spheroidene monooxygenase. (232 aa)    
Predicted Functional Partners:
Kfla_4422
Hypothetical protein.
 
     0.773
Kfla_4175
PFAM: Domain of unknown function DUF1929; Kelch repeat protein; Kelch repeat-containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: mch:Mchl_1370 galactose oxidase.
  
     0.576
Kfla_4068
PFAM: aminoglycoside phosphotransferase; KEGG: pla:Plav_0022 aminoglycoside phosphotransferase.
       0.515
Kfla_4070
KEGG: pfs:PFLU5557 hypothetical protein.
       0.413
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.