STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4080PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (366 aa)    
Predicted Functional Partners:
Kfla_4079
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bgl:bglu_2g14790 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.
 
 0.974
Kfla_4078
PFAM: periplasmic binding protein; KEGG: avi:Avi_5019 ABC transporter substrate binding protein (iron).
 
 
 0.959
Kfla_4484
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_4222 ABC transporter related.
 
 0.892
Kfla_4459
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3790 ABC transporter related.
 
 0.891
Kfla_1139
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcm:Bcenmc03_1330 ABC transporter related.
 
 0.890
Kfla_5847
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3334 hypothetical protein.
 
 0.873
Kfla_5165
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_2824 ABC transporter related.
 
 0.872
Kfla_0601
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit.
 
 0.858
Kfla_6701
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_3639 ABC transporter related.
 
 0.843
Kfla_4460
PFAM: periplasmic binding protein; KEGG: psb:Psyr_5103 periplasmic binding protein.
 
 
 0.831
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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