STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4172PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: xau:Xaut_0419 copper resistance D domain- containing protein. (554 aa)    
Predicted Functional Partners:
Kfla_4173
Conserved hypothetical protein; KEGG: rpc:RPC_2425 nuclear export factor GLE1.
 
  
 0.988
Kfla_5751
PFAM: nuclear export factor GLE1; KEGG: bcs:BCAN_A0055 hypothetical protein.
 
  
 0.911
Kfla_5848
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgl:bglu_2g17140 2,4-dienoyl-CoA reductase.
    
   0.765
Kfla_4016
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bxe:Bxe_B1834 Tat-translocated enzyme, Dyp- type peroxidase.
 
  
 0.731
Kfla_3709
PFAM: protein of unknown function DUF461; KEGG: mpt:Mpe_A0691 hypothetical protein.
  
    0.724
Kfla_3710
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_A3951 Dyp-type peroxidase.
 
  
 0.719
Kfla_1017
Hypothetical protein; KEGG: similar to HLA-B-associated transcript 3.
  
    0.701
Kfla_3407
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: ara:Arad_7929 iron-dependent peroxidase.
  
  
 0.627
Kfla_5972
KEGG: SNF2 superfamily protein.
 
   
 0.623
nadE-2
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.501
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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