STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4320TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA4047 haloacid dehalogenase-like hydrolase. (207 aa)    
Predicted Functional Partners:
Kfla_0903
PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_pAT_728 hypothetical protein.
   
 
  0.900
Kfla_1385
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
     
  0.900
Kfla_5120
PFAM: alpha/beta hydrolase fold; KEGG: msl:Msil_3226 alpha/beta hydrolase fold protein.
   
 
  0.900
Kfla_6391
PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_3097 alpha/beta hydrolase fold.
   
 
  0.900
Kfla_4321
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4255 major facilitator transporter.
       0.773
Kfla_4322
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bte:BTH_II0060 transcription regulator ArsR.
       0.547
Kfla_3447
PFAM: carbonic anhydrase; KEGG: pst:PSPTO_1340 carbonic anhydrase.
  
   
 0.505
Kfla_3961
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A3093 hypothetical protein.
  
     0.502
Kfla_4323
Hypothetical protein.
       0.462
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.