STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4561PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sml:Smlt2001 putative ABC transporter ATP- binding protein. (589 aa)    
Predicted Functional Partners:
Kfla_0770
PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: xcv:XCV0592 iron chelator utilization protein.
 
 
    0.897
Kfla_2960
KEGG: rme:Rmet_4580 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.843
Kfla_4560
PFAM: regulatory protein TetR; KEGG: mxa:MXAN_1727 TetR family transcriptional regulator.
 
     0.829
Kfla_4728
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_4408 amino acid ABC transporter ATP- binding protein.
 
     
0.759
Kfla_5001
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_3147 ABC transporter related.
 
     
0.716
Kfla_5198
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3762 ABC transporter-related protein.
 
     
0.620
Kfla_4559
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_5410 ECF subfamily RNA polymerase sigma factor.
       0.544
Kfla_3393
TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: tgr:Tgr7_1450 threonyl-tRNA synthetase.
  
   0.521
Kfla_3375
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pfs:PFLU2676 putative cell division protein FtsH.
 
 0.515
Kfla_5988
PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family, putative.
  
     0.466
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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