STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4565Conserved hypothetical protein; KEGG: scl:sce5487 protein kinase. (663 aa)    
Predicted Functional Partners:
Kfla_4567
PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1; SNP.
 
     0.959
Kfla_4564
Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bte:BTH_II2227 CaiB/BaiF family protein; Belongs to the CoA-transferase III family.
     0.947
rbsK-2
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
     0.806
Kfla_4572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component.
 
     0.799
Kfla_4563
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: bpd:BURPS668_A3029 HpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
     0.790
Kfla_4569
PFAM: ADP-ribosylation/Crystallin J1; KEGG: sea:SeAg_B4313 ADP-ribosylglycohydrolase superfamily.
 
     0.788
Kfla_4570
PFAM: extracellular solute-binding protein family 1; KEGG: ara:Arad_8979 sugar ABC transporter.
 
     0.783
Kfla_1991
PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1.
 
     0.763
Kfla_4571
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
 
     0.651
Kfla_4568
Hypothetical protein.
       0.557
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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